Universidad Peruana Cayetano Heredia

Genome sequence and analysis of the tuber crop potato

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dc.contributor.author Xu, X.
dc.contributor.author Pan, S.
dc.contributor.author Cheng, S.
dc.contributor.author Zhang, B.
dc.contributor.author Mu, D.
dc.contributor.author Ni, P.
dc.contributor.author Zhang, G.
dc.contributor.author Yang, S.
dc.contributor.author Li, R.
dc.contributor.author Wang, J.
dc.contributor.author Orjeda, G.
dc.contributor.author Guzman, F.
dc.contributor.author Torres, M.
dc.contributor.author Lozano, R.
dc.contributor.author Ponce, O.
dc.contributor.author Martinez, D.
dc.contributor.author De La Cruz, G.
dc.contributor.author Chakrabarti, S.K.
dc.contributor.author Patil, V.U.
dc.contributor.author Skryabin, G.
dc.contributor.author Kuznetsov, B.B.
dc.contributor.author Ravin, N.V.
dc.contributor.author Kolganova, T.V.
dc.contributor.author Beletsky, A.V.
dc.contributor.author Mardanov, A.V.
dc.contributor.author Di Genova, A.
dc.contributor.author Bolser, D.M.
dc.contributor.author Martin, D.M.A.
dc.contributor.author Li, G.
dc.contributor.author Yang, Y.
dc.contributor.author Kuang, H.
dc.contributor.author Hu, Q.
dc.contributor.author Xiong, X.
dc.contributor.author Bishop, G.J.
dc.contributor.author Sagredo, B.
dc.contributor.author Mejía, N.
dc.contributor.author Zagorski, W.
dc.contributor.author Gromadka, R.
dc.contributor.author Gawor, J.
dc.contributor.author Szczesny, P.
dc.contributor.author Huang, S.
dc.contributor.author Zhang, Z.
dc.contributor.author Liang, C.
dc.contributor.author He, J.
dc.contributor.author Li, Y.
dc.contributor.author He, Y.
dc.contributor.author Xu, J.
dc.contributor.author Zhang, Y.
dc.contributor.author Xie, B.
dc.contributor.author Du, Y.
dc.contributor.author Qu, D.
dc.contributor.author Bonierbale, M.
dc.contributor.author Ghislain, M.
dc.contributor.author Herrera, M.D.R.
dc.contributor.author Giuliano, G.
dc.contributor.author Pietrella, M.
dc.contributor.author Perrotta, G.
dc.contributor.author Facella, P.
dc.contributor.author O'Brien, K.
dc.contributor.author Feingold, S.E.
dc.contributor.author Barreiro, L.E.
dc.contributor.author Massa, G.A.
dc.contributor.author Diambra, L.
dc.contributor.author Whitty, B.R.
dc.contributor.author Vaillancourt, B.
dc.contributor.author Lin, H.
dc.contributor.author Massa, A.N.
dc.contributor.author Geoffroy, M.
dc.contributor.author Lundback, S.
dc.contributor.author DellaPenna, D.
dc.contributor.author Buell, C.R.
dc.contributor.author Sharma, S.K.
dc.contributor.author Marshall, D.F.
dc.contributor.author Waugh, R.
dc.contributor.author Bryan, G.J.
dc.contributor.author Destefanis, M.
dc.contributor.author Nagy, I.
dc.contributor.author Milbourne, D.
dc.contributor.author Thomson, S.J.
dc.contributor.author Fiers, M.
dc.contributor.author Jacobs, J.M.E.
dc.contributor.author Nielsen, K.L.
dc.contributor.author Sønderkær, M.
dc.contributor.author Iovene, M.
dc.contributor.author Torres, G.A.
dc.contributor.author Jiang, J.
dc.contributor.author Veilleux, R.E.
dc.contributor.author Bachem, C.W.B.
dc.contributor.author De Boer, J.
dc.contributor.author Borm, T.
dc.contributor.author Kloosterman, B.
dc.contributor.author Van Eck, H.
dc.contributor.author Datema, E.
dc.contributor.author Hekkert, B.L.
dc.contributor.author Goverse, A.
dc.contributor.author Van Ham, R.C.H.J.
dc.contributor.author Visser, R.G.F.
dc.date.accessioned 2022-01-18T19:26:49Z
dc.date.available 2022-01-18T19:26:49Z
dc.date.issued 2011
dc.identifier.uri https://hdl.handle.net/20.500.12866/10917
dc.description.abstract Potato (Solanum tuberosum L.) is the world's most important non-grain food crop and is central to global food security. It is clonally propagated, highly heterozygous, autotetraploid, and suffers acute inbreeding depression. Here we use a homozygous doubled-monoploid potato clone to sequence and assemble 86% of the 844-megabase genome. We predict 39,031 protein-coding genes and present evidence for at least two genome duplication events indicative of a palaeopolyploid origin. As the first genome sequence of an asterid, the potato genome reveals 2,642 genes specific to this large angiosperm clade. We also sequenced a heterozygous diploid clone and show that gene presence/absence variants and other potentially deleterious mutations occur frequently and are a likely cause of inbreeding depression. Gene family expansion, tissue-specific expression and recruitment of genes to new pathways contributed to the evolution of tuber development. The potato genome sequence provides a platform for genetic improvement of this vital crop. en_US
dc.language.iso eng
dc.publisher Springer Nature
dc.relation.ispartofseries Nature
dc.rights info:eu-repo/semantics/restrictedAccess
dc.rights.uri https://creativecommons.org/licenses/by-nc-nd/4.0/deed.es
dc.subject Genetic Variation en_US
dc.subject Depression en_US
dc.subject Molecular Sequence Data en_US
dc.subject Gene Expression en_US
dc.subject Genome en_US
dc.subject Haplotype en_US
dc.subject Evolution Molecular en_US
dc.subject Heterozygosity en_US
dc.subject Food Security en_US
dc.subject Genome Plant en_US
dc.subject Potato en_US
dc.subject Solanum Tuberosum en_US
dc.subject Gene Expression Regulation Plant en_US
dc.subject Immunity Innate en_US
dc.subject Multigene Family en_US
dc.subject Plant Diseases en_US
dc.subject Ploidies en_US
dc.subject Tuber en_US
dc.title Genome sequence and analysis of the tuber crop potato en_US
dc.type info:eu-repo/semantics/article
dc.identifier.doi https://doi.org/10.1038/nature10158
dc.subject.ocde https://purl.org/pe-repo/ocde/ford#3.01.00
dc.relation.issn 1476-4687


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