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The complete mitochondrial genome of the lowland paca (Cuniculus paca) and its phylogenetic relationship with other New World hystricognath rodents

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dc.contributor.author Li, J.
dc.contributor.author Mayor, P.
dc.contributor.author Santolalla Robles, Meddly Leslye
dc.contributor.author Greenwood, A.D.
dc.coverage.spatial Río Yavarí Mirín, Loreto, Perú
dc.date.accessioned 2023-12-07T22:33:26Z
dc.date.available 2023-12-07T22:33:26Z
dc.date.issued 2023
dc.identifier.uri https://hdl.handle.net/20.500.12866/14730
dc.description.abstract The lowland paca (Cuniculus paca) is a nocturnal, widespread, and solitary large-sized rodent in the family Cuniculidae, and one of the most frequently hunted mammals in the Neotropical forests of Latin America. We assembled the first complete mitochondrial genome of lowland paca using three closely related hystricognath species as reference sequences. The mitochondrial genome is 16,770 basepairs (bp) in length, with similar characteristics of vertebrate mitochondrial genomes. We performed phylogenetic analyses using 26 mitochondrial genome of hystricognath species based on thirteen protein-coding genes. The result confirms the taxonomical placement among the New World hystricognath rodents with high support. The placement is consistent with previous phylogenetic studies based on individual mitochondrial and nuclear genes. The current study improves the phylogenic resolution of hystricognath rodents. en_US
dc.language.iso eng
dc.publisher Taylor and Francis
dc.relation.ispartofseries Mitochondrial DNA Part B: Resources
dc.rights info:eu-repo/semantics/restrictedAccess
dc.rights.uri https://creativecommons.org/licenses/by-nc-nd/4.0/deed.es
dc.subject Mitogenome en_US
dc.subject Hystricognath en_US
dc.subject Cuniculus en_US
dc.subject Phylogenetics en_US
dc.subject.mesh Mitocondrias
dc.subject.mesh Roedores
dc.subject.mesh Cuniculidae
dc.subject.mesh Filogenia
dc.title The complete mitochondrial genome of the lowland paca (Cuniculus paca) and its phylogenetic relationship with other New World hystricognath rodents en_US
dc.type info:eu-repo/semantics/article
dc.identifier.doi https://doi.org/10.1080/23802359.2023.2275830
dc.subject.ocde https://purl.org/pe-repo/ocde/ford#1.06.01
dc.relation.issn 2380-2359


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